The heat method is a very interesting paper for distance computation:
https://www.cs.cmu.edu/~kmcrane/Projects/HeatMethod/paperCACM.pdf
The idea behind the paper is that, heat travels along the surface of an object essentially in a geodesic like fashion. And so the time it takes for heat to travel from a hot spot to any point on a surface is irreconcilably correlated with the geodesic distance.
The paper first considers the general, analytic case and then suggests discretization approaches. What I am very confused about is the mention of the heat flow function $u$ across the paper. Consider this equation for example:
That is the discrete laplacian operator applied to $u$ or $\Delta u$. There are multiple other sections in the paper that mention $u$. From my reading, $u$ seems to be a suitable function that approximates heat flow on the surface of a manifold?
I don't really see an equation of the form $u = \text{expression}$ nor do I see descriptions of its properties nor suggestions for a good $u$ function. What is $u$? Where did $u$ come from? Where did $u$ go? Where did $u$ come from? cotan, i, o?